Package de.uni_halle.informatik.biodata.mp.annotation.bigg.ext.fbc

Class BiGGFBCAnnotator

java.lang.Object

de.uni_halle.informatik.biodata.mp.annotation.AbstractAnnotator

de.uni_halle.informatik.biodata.mp.annotation.bigg.AbstractBiGGAnnotator

de.uni_halle.informatik.biodata.mp.annotation.bigg.ext.fbc.BiGGFBCAnnotator

All Implemented Interfaces:

IAnnotateSBases<org.sbml.jsbml.Model>, IReportDiffs, IReportStatus

public class BiGGFBCAnnotator
extends AbstractBiGGAnnotator
implements IAnnotateSBases<org.sbml.jsbml.Model>

Field Summary

Fields inherited from class de.uni_halle.informatik.biodata.mp.annotation.bigg.AbstractBiGGAnnotator

bigg, biGGAnnotationParameters, registry

Constructor Summary

Constructors

Constructor	Description
BiGGFBCAnnotator(BiGGDB bigg, BiGGAnnotationParameters parameters, Registry registry, List<ProgressObserver> observers)

Method Summary

Modifier and Type	Method	Description
void	annotate(org.sbml.jsbml.Model model)

Methods inherited from class de.uni_halle.informatik.biodata.mp.annotation.bigg.AbstractBiGGAnnotator

getBiGGIdFromResources

Methods inherited from class de.uni_halle.informatik.biodata.mp.annotation.AbstractAnnotator

diffReport, getObservers, statusReport

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface de.uni_halle.informatik.biodata.mp.annotation.IAnnotateSBases

annotate

Constructor Details

BiGGFBCAnnotator

public BiGGFBCAnnotator(BiGGDB bigg,
 BiGGAnnotationParameters parameters,
 Registry registry,
 List<ProgressObserver> observers)

Method Details

annotate

public void annotate(org.sbml.jsbml.Model model)
              throws SQLException,
AnnotationException

Specified by:

annotate in interface IAnnotateSBases<org.sbml.jsbml.Model>

Throws:

SQLException

AnnotationException