Package de.uni_halle.informatik.biodata.mp.annotation.bigg.ext.fbc

Class BiGGGeneProductReferencesAnnotator

java.lang.Object

de.uni_halle.informatik.biodata.mp.annotation.bigg.ext.fbc.BiGGGeneProductReferencesAnnotator

public class BiGGGeneProductReferencesAnnotator
extends Object

Constructor Summary

Constructors

Constructor	Description
BiGGGeneProductReferencesAnnotator()

Method Summary

Modifier and Type	Method	Description
void	update(org.sbml.jsbml.ext.fbc.GeneProduct gp)	Updates the reference of a gene product in the geneProductReferences map using the gene product's ID.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

BiGGGeneProductReferencesAnnotator

public BiGGGeneProductReferencesAnnotator()

Method Details

update

public void update(org.sbml.jsbml.ext.fbc.GeneProduct gp)

Updates the reference of a gene product in the geneProductReferences map using the gene product's ID. If the gene product ID starts with "G_", it strips this prefix before updating. If the map is initially empty, it initializes the map with the current model's reactions.

Parameters:

gp - The GeneProduct whose reference needs to be updated.