fern.benchmark

Class SimulatorFireTypes

java.lang.Object

fern.benchmark.Benchmark

fern.benchmark.SimulatorPerformance

fern.benchmark.SimulatorTime

fern.benchmark.SimulatorFireTypes

public class SimulatorFireTypes
extends SimulatorTime

Benchmark the Simulator.FireTypes for a given net. Use this benchmark, if you want to know, how many SSA steps are performed at tau leaping for a given network. The benchmark method can be invoked repeatedly to calculate the average over many simulations.

Author:

Florian Erhard

Constructor Summary

Constructors

Constructor and Description
SimulatorFireTypes(Network net, double time) Create the benchmark and defines the time each simulator has to run in one iteration.

Method Summary

Modifier and Type	Method and Description
void	present() Present results of this benchmark is gnuplot and text to stdout.

Methods inherited from class fern.benchmark.SimulatorPerformance

benchmark, getShowSteps, getSimulators, setShowSteps

Methods inherited from class fern.benchmark.Benchmark

addData, clearData, createRandomDoubleArray, end, getNumBins, setNumBins, start, toGnuplot, toGnuplot, toGnuPlotAsHistogram, toGnuPlotAsHistogram

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SimulatorFireTypes

public SimulatorFireTypes(Network net,
                          double time)

Create the benchmark and defines the time each simulator has to run in one iteration.

Parameters:

net - the network to benchmark

time - running time for the simulators

Method Detail

present

public void present()

Present results of this benchmark is gnuplot and text to stdout.

Overrides:

present in class SimulatorTime