| Package | Description | 
|---|---|
| fern.simulation.algorithm | 
| Modifier and Type | Class and Description | 
|---|---|
class  | 
AbstractBaseTauLeaping
Base class for all tau leaping procedures (which are different in the methods choosing the
 timestep candidates for critical and noncritical reactions). 
 | 
class  | 
AbstractTauLeapingPropensityBoundSimulator
There are some possibilities to bind the expected change of the propensities by a
 value epsilon in order to fulfill the leap condition. 
 | 
class  | 
CompositionRejection
This is an enhanced version of the original Direct method developed by Gillespie. 
 | 
class  | 
TauLeapingAbsoluteBoundSimulator
There are some possibilities to bind the expected change of the propensities by a value epsilon
 in order to fulfill the leap condition. 
 | 
class  | 
TauLeapingRelativeBoundSimulator
There are some possibilities to bind the expected change of the propensities by a value epsilon
 in order to fulfill the leap condition. 
 | 
class  | 
TauLeapingSpeciesPopulationBoundSimulator
There are some possibilities to bind the expected change of the propensities by a
 value epsilon in order to fulfill the leap condition. 
 | 
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