Uses of Interface
fern.simulation.controller.SimulationController

Packages that use SimulationController

Package	Description
fern.simulation
fern.simulation.algorithm
fern.simulation.controller
fern.simulation.observer

Uses of SimulationController in fern.simulation

Methods in fern.simulation with parameters of type SimulationController

Modifier and Type	Method and Description
abstract void	Simulator.performStep(SimulationController control) Performs one simulation step.
void	Simulator.run(SimulationController control) Runs a simulation, after it's initialized by calling Simulator.preRun() (allows to continue a simulation).
void	Simulator.start(SimulationController control) Start the simulation with the given SimulationController.

Uses of SimulationController in fern.simulation.algorithm

Methods in fern.simulation.algorithm with parameters of type SimulationController

Modifier and Type	Method and Description
void	HybridMaximalTimeStep.performStep(SimulationController control)
void	GillespieEnhanced.performStep(SimulationController control)
void	CompositionRejection.performStep(SimulationController control)
void	GibsonBruckSimulator.performStep(SimulationController control)
void	GillespieSimple.performStep(SimulationController control)
void	AbstractBaseTauLeaping.performStep(SimulationController control) Performs a tau leaping step.

Uses of SimulationController in fern.simulation.controller

Classes in fern.simulation.controller that implement SimulationController

Modifier and Type	Class and Description
class	AmountLowerThanController
class	AndController Implements a SimulationController composed of many SimulationController.
class	DefaultController The probably most common implementation of an SimulationController.
class	OrController Implements a SimulationController composed of many SimulationController.

Constructors in fern.simulation.controller with parameters of type SimulationController

Constructor and Description
AndController(SimulationController... controllers)
OrController(SimulationController... controllers)

Uses of SimulationController in fern.simulation.observer

Classes in fern.simulation.observer that implement SimulationController

Modifier and Type	Class and Description
class	AmountAtMomentObserver Observes the amount of some molecule species at a certain moment.