Package org.simulator.sbml

Classes for storing and interpreting an SBML model.

See:
Description

Interface Summary

SBMLValueHolder

A SBMLValueHolder is necessary to provide the current values for Compartments, Species, Parameters, and SpeciesReferences at simulation time.

Class Summary

AlgebraicRuleConverter	This class converts the algebraic rules of a model to assignment rules based on the given matching
SBMLEventInProgress	This class represents a compilation of all information calculated during simulation concerning events in SBML.
SBMLEventInProgressWithDelay	This class represents a compilation of all information calculated during simulation concerning events in SBML.
SBMLinterpreter	This differential equation system (DESystem) takes a model in SBML format and maps it to a data structure that is understood by the AbstractDESSolver.

Package org.simulator.sbml Description

Classes for storing and interpreting an SBML model. The most important class is SBMLinterpreter that can return the current vector of derivatives to the solver.