fern.network

Class NetworkLoader

java.lang.Object

fern.network.NetworkLoader

public class NetworkLoader
extends Object

Constructor Summary

Constructors

Constructor and Description
NetworkLoader()

Method Summary

Modifier and Type	Method and Description
static String[][]	getAvailableTypes() Gets types of networks that are readable by FERN.
static Network	readNetwork(File file) Tries to read the given file and returns the network in it (if there is one)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

NetworkLoader

public NetworkLoader()

Method Detail

getAvailableTypes

public static String[][] getAvailableTypes()

Gets types of networks that are readable by FERN. They are returned as String[N][2] containing for N types a description and the file pattern.

Returns:

readable file types

readNetwork

public static Network readNetwork(File file)
                           throws IOException,
                                  org.jdom.JDOMException,
                                  FeatureNotSupportedException,
                                  ClassNotFoundException

Tries to read the given file and returns the network in it (if there is one)

Parameters:

file - network file

Returns:

network object

Throws:

IOException - file could not be found

org.jdom.JDOMException - file could not be parsed correctly

FeatureNotSupportedException - file contains a not supported sbml feature

ClassNotFoundException - the class SBMLNetwork could not be found