

PREV NEXT  FRAMES NO FRAMES 
Packages that use org.simulator.math.odes  

org.simulator.math.odes  The different solver classes that are all derived from AbstractDESSolver. 
org.simulator.sbml  Classes for storing and interpreting an SBML model. 
org.simulator.sedml  Classes for storing and interpreting an SBML model. 
Classes in org.simulator.math.odes used by org.simulator.math.odes  

AbstractDESSolver
This Class represents an abstract solver for eventdriven DES 

AdamsBashforthSolver
This class is a wrapper for the AdamsBashforth solver in the Apache Math Library. 

AdamsMoultonSolver
This class is a wrapper for the AdamsMoulton solver in the Apache Math Library. 

AdaptiveStepsizeIntegrator
This is an abstract class for solvers with adaptive stepsizes and given relative and absolute tolerances. 

DelayValueHolder
This interface describes a value holder that can compute values with delay. 

DESSolver
A DESSolver provides algorithm for the numerical simulation of given
DESystem s. 

DESystem
A differential equation system describes how to compute the rate of change at a given state of the system. 

DormandPrince54Solver
This class is a wrapper for the DormandPrince54 solver in the Apache Math Library. 

DormandPrince853Solver
This class is a wrapper for the DormandPrince853 solver in the Apache Math Library. 

EulerMethod
In this class the Euler method for integration a differential equation system is implemented. 

EventDESystem
This Class represents an eventdriven differential equation system 

EventInProgress
This class represents a compilation of the values and execution times during simulation concerning events. 

FirstOrderSolver
This class is the superclass of the wrapper classes for the solvers of the Apache Math library. 

GraggBulirschStoerSolver
This class is a wrapper for the GraggBulirschStoer solver in the Apache Math Library. 

HighamHall54Solver
This class is a wrapper for the HighamHall54 solver in the Apache Math Library. 

MultiTable
This data structure contains the an array of sorted time points and a matrix organized in one column per quantity for which data (measurement or simulation) are gathered. 

MultiTable.Block
A MultiTable.Block is a data structure with a twodimensional double array
of actual data together with identifiers for each column. 

MultiTable.Block.Column
A column of the MultiTable.Block matrix. 

RosenbrockSolver
An implementation of Rosenbrock's method to approximate ODE solutions. 

RungeKutta_EventSolver
RungeKutta method. 
Classes in org.simulator.math.odes used by org.simulator.sbml  

DelayedDESystem
This interface describes a differential equation system containing values with a delay function. 

DelayValueHolder
This interface describes a value holder that can compute values with delay. 

DESystem
A differential equation system describes how to compute the rate of change at a given state of the system. 

EventDESystem
This Class represents an eventdriven differential equation system 

EventInProgress
This class represents a compilation of the values and execution times during simulation concerning events. 

FastProcessDESystem
This interface describes differential equation systems with fast processes. 

RichDESystem
A RichDESystem is a DESystem that provides additional
information besides the pure rate of change during its evaluation. 
Classes in org.simulator.math.odes used by org.simulator.sedml  

AbstractDESSolver
This Class represents an abstract solver for eventdriven DES 

MultiTable
This data structure contains the an array of sorted time points and a matrix organized in one column per quantity for which data (measurement or simulation) are gathered. 


PREV NEXT  FRAMES NO FRAMES 