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D

d1 - Static variable in class org.simulator.math.odes.RosenbrockSolver
 
d2 - Static variable in class org.simulator.math.odes.RosenbrockSolver
 
d3 - Static variable in class org.simulator.math.odes.RosenbrockSolver
 
d4 - Static variable in class org.simulator.math.odes.RosenbrockSolver
 
defaultValue - Variable in class org.simulator.math.QualityMeasure
The return value of the distance function in cases where the distance cannot be computed.
delay(ASTNodeValue, ASTNodeValue, String, double) - Method in class org.simulator.sbml.astnode.ASTNodeInterpreter
 
DelayedDESystem - Interface in org.simulator.math.odes
This interface describes a differential equation system containing values with a delay function.
delayObject - Variable in class org.simulator.sbml.SBMLEventInProgress
The delay math of the event
DelayValueHolder - Interface in org.simulator.math.odes
This interface describes a value holder that can compute values with delay.
denominator - Variable in class org.simulator.sbml.astnode.ASTNodeValue
The denominator of the corresponding ASTNode
DESSolver - Interface in org.simulator.math.odes
A DESSolver provides algorithm for the numerical simulation of given DESystems.
DESystem - Interface in org.simulator.math.odes
A differential equation system describes how to compute the rate of change at a given state of the system.
distance(MultiTable.Block.Column, MultiTable.Block.Column, double) - Method in class org.simulator.math.N_Metric
 
distance(MultiTable.Block.Column, MultiTable.Block.Column, double) - Method in class org.simulator.math.PearsonCorrelation
 
distance(MultiTable.Block.Column, MultiTable.Block.Column) - Method in class org.simulator.math.QualityMeasure
Returns the distance of the two vectors x and y where the currently set root is used.
distance(MultiTable.Block.Column, MultiTable.Block.Column, double) - Method in class org.simulator.math.QualityMeasure
Returns the distance of the two vectors x and y with the given root.
distance(MultiTable, MultiTable) - Method in class org.simulator.math.QualityMeasure
 
distance(MultiTable.Block, MultiTable.Block) - Method in class org.simulator.math.QualityMeasure
 
distance(MultiTable.Block.Column, MultiTable.Block.Column, double) - Method in class org.simulator.math.Relative_N_Metric
 
DistanceSum - Class in org.simulator.math
Sets the overall distance to the sum of the column distances.
DistanceSum() - Constructor for class org.simulator.math.DistanceSum
 
distanceToZero(MultiTable.Block.Column, double) - Method in class org.simulator.math.N_Metric
 
DivideValue - Class in org.simulator.sbml.astnode
This class computes and stores values of ASTNodes that refer to a division object.
DivideValue(ASTNodeInterpreter, ASTNode) - Constructor for class org.simulator.sbml.astnode.DivideValue
 
DormandPrince54Solver - Class in org.simulator.math.odes
This class is a wrapper for the Dormand-Prince-54 solver in the Apache Math Library.
DormandPrince54Solver() - Constructor for class org.simulator.math.odes.DormandPrince54Solver
default constructor
DormandPrince54Solver(DormandPrince54Solver) - Constructor for class org.simulator.math.odes.DormandPrince54Solver
clone constructor
DormandPrince54Solver(double) - Constructor for class org.simulator.math.odes.DormandPrince54Solver
 
DormandPrince54Solver(double, boolean) - Constructor for class org.simulator.math.odes.DormandPrince54Solver
 
DormandPrince853Solver - Class in org.simulator.math.odes
This class is a wrapper for the Dormand-Prince-853 solver in the Apache Math Library.
DormandPrince853Solver() - Constructor for class org.simulator.math.odes.DormandPrince853Solver
default constructor
DormandPrince853Solver(DormandPrince853Solver) - Constructor for class org.simulator.math.odes.DormandPrince853Solver
clone constructor
DormandPrince853Solver(double) - Constructor for class org.simulator.math.odes.DormandPrince853Solver
 
DormandPrince853Solver(double, boolean) - Constructor for class org.simulator.math.odes.DormandPrince853Solver
 
doubleValue - Variable in class org.simulator.sbml.astnode.ASTNodeValue
Double value of the node (if the type of the value is double)

Generated at April 19 2013
Version 1.3 Revision 424
A B C D E F G H I K L M N O P Q R S T U V X Y Z