Uses of Package
org.simulator.math.odes

Packages that use org.simulator.math.odes

org.simulator	This package simply contains a default main program to display very basic licensing terms and other information.
org.simulator.io	Import and export of files.
org.simulator.math	Classes that contain several mathematical operations.
org.simulator.math.odes	The various solver classes that are all derived from AbstractDESSolver.
org.simulator.sbml	Classes for storing and interpreting an SBML model.
org.simulator.sedml	Classes for reading and executing SED-ML files.

Classes in org.simulator.math.odes used by org.simulator

AbstractDESSolver
This Class represents an abstract solver for event-driven DES

MultiTable
This data structure contains the an array of sorted time points and a matrix organized in one column per quantity for which data (measurement or simulation) are gathered.

Classes in org.simulator.math.odes used by org.simulator.io

MultiTable
This data structure contains the an array of sorted time points and a matrix organized in one column per quantity for which data (measurement or simulation) are gathered.

Classes in org.simulator.math.odes used by org.simulator.math

MultiTable
This data structure contains the an array of sorted time points and a matrix organized in one column per quantity for which data (measurement or simulation) are gathered.

MultiTable.Block
A MultiTable.Block is a data structure with a two-dimensional double array of actual data together with identifiers for each column.

MultiTable.Block.Column
A column of the MultiTable.Block matrix.

Classes in org.simulator.math.odes used by org.simulator.math.odes

AbstractDESSolver
This Class represents an abstract solver for event-driven DES

AdamsBashforthSolver
This class is a wrapper for the Adams-Bashforth solver in the Apache Math Library.

AdamsMoultonSolver
This class is a wrapper for the Adams-Moulton solver in the Apache Math Library.

AdaptiveStepsizeIntegrator
This is an abstract class for solvers with adaptive stepsizes and given relative and absolute tolerances.

DelayValueHolder
This interface describes a value holder that can compute values with delay.

DESSolver
A DESSolver provides algorithm for the numerical simulation of given DESystems.

DESystem
A differential equation system describes how to compute the rate of change at a given state of the system.

DormandPrince54Solver
This class is a wrapper for the Dormand-Prince-54 solver in the Apache Math Library.

DormandPrince853Solver
This class is a wrapper for the Dormand-Prince-853 solver in the Apache Math Library.

EulerMethod
In this class the Euler method for integration a differential equation system is implemented.

EventDESystem
This class represents an event-driven differential equation system

EventInProgress
This class represents a compilation of the values and execution times during simulation concerning events.

FastProcessDESystem
This interface describes differential equation systems with fast processes.

FirstOrderSolver
This class is the superclass of the wrapper classes for the solvers of the Apache Math Library.

GraggBulirschStoerSolver
This class is a wrapper for the Gragg-Bulirsch-Stoer solver in the Apache Math Library.

HighamHall54Solver
This class is a wrapper for the Higham-Hall-54 solver in the Apache Math Library.

MultiTable
This data structure contains the an array of sorted time points and a matrix organized in one column per quantity for which data (measurement or simulation) are gathered.

MultiTable.Block
A MultiTable.Block is a data structure with a two-dimensional double array of actual data together with identifiers for each column.

MultiTable.Block.Column
A column of the MultiTable.Block matrix.

RosenbrockSolver
An implementation of Rosenbrock's method to approximate ODE solutions.

RungeKutta_EventSolver
Runge-Kutta method.

Classes in org.simulator.math.odes used by org.simulator.sbml

DelayedDESystem
This interface describes a differential equation system containing values with a delay function.

DelayValueHolder
This interface describes a value holder that can compute values with delay.

DESystem
A differential equation system describes how to compute the rate of change at a given state of the system.

EventDESystem
This class represents an event-driven differential equation system

EventInProgress
This class represents a compilation of the values and execution times during simulation concerning events.

FastProcessDESystem
This interface describes differential equation systems with fast processes.

RichDESystem
A RichDESystem is a DESystem that provides additional information besides the pure rate of change during its evaluation.

Classes in org.simulator.math.odes used by org.simulator.sedml

AbstractDESSolver
This Class represents an abstract solver for event-driven DES

MultiTable
This data structure contains the an array of sorted time points and a matrix organized in one column per quantity for which data (measurement or simulation) are gathered.