Package | Description |
---|---|
org.simulator.math.odes |
The various solver classes that are all derived from
AbstractDESSolver . |
org.simulator.sbml |
Classes for storing and interpreting an
SBML
model.
|
Modifier and Type | Class and Description |
---|---|
class |
AbstractDESSolver
This Class represents an abstract solver for event-driven DES
|
class |
AdamsBashforthSolver
This class is a wrapper for the Adams-Bashforth solver in the
Apache Math
Library.
|
class |
AdamsMoultonSolver
This class is a wrapper for the Adams-Moulton solver in the
Apache Math
Library.
|
class |
AdaptiveStepsizeIntegrator
This is an abstract class for solvers with adaptive stepsizes and given relative and absolute
tolerances.
|
class |
DormandPrince54Solver
This class is a wrapper for the Dormand-Prince-54 solver in the
Apache Math
Library.
|
class |
DormandPrince853Solver
This class is a wrapper for the Dormand-Prince-853 solver in the
Apache Math
Library.
|
class |
EulerMethod
In this class the Euler method for integration a differential equation system is implemented.
|
class |
FirstOrderSolver
This class is the superclass of the wrapper classes for the solvers of the
Apache Math
Library.
|
class |
GraggBulirschStoerSolver
This class is a wrapper for the Gragg-Bulirsch-Stoer solver in the
Apache Math
Library.
|
class |
HighamHall54Solver
This class is a wrapper for the Higham-Hall-54 solver in the
Apache Math
Library.
|
class |
RosenbrockSolver
An implementation of Rosenbrock's method to approximate ODE solutions.
|
class |
RungeKutta_EventSolver
Runge-Kutta method.
|
Modifier and Type | Method and Description |
---|---|
void |
DelayedDESystem.registerDelayValueHolder(DelayValueHolder dvh) |
Modifier and Type | Interface and Description |
---|---|
interface |
SBMLValueHolder
A
SBMLValueHolder is necessary to provide the current values for Compartment s,
Species , Parameter s, and SpeciesReference s at simulation time. |
Modifier and Type | Class and Description |
---|---|
class |
EquationSystem |
class |
SBMLinterpreter
This differential equation system (
DESystem ) takes a model in
SBML
format and maps it to a data structure that is understood by the AbstractDESSolver . |
Modifier and Type | Method and Description |
---|---|
void |
EquationSystem.registerDelayValueHolder(DelayValueHolder dvh) |
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